SE3020673

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_810
  • Malus domestica
  • SE3020673
  • Mutator
  • MadM8
  • MDC012728.452:6082-6271
  • TATCACCTA
  • GGGTAATGCTAGGGAGACCAAAATTTTAAATTAAATTTGCAAACCAAATGATATG

Secondary structure and sequence

TSD    TIR
5'



3' 
TATCACCTAA       G              -A                    C        ----------   TCATCAATAGGAAA     AA   AA
          GGGTAAT CTAGGGAGACCAAA  TTTTAAATTAAATTTGCAAA CAAATGAT          ATG              TAAGC  GTT  
          ||||||| ||||||||||||||  |||||||||||||||||||| ||||||||          |||              |||||  |||   
          TCCATTA GATTCCTCTGGTTT  AAAATTTAGTTTAAACGTTT GTTTACTA          TAC              ATTCG  CAA  
 AATCCACTA       G              AA                    A        CATCAACAAC   TAACCTAATAATAA     --   CT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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