SE3020693

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_830
  • Malus domestica
  • SE3020693
  • Mutator
  • MadM30
  • MDC007072.544:1689-1850
  • ATTATTTAG
  • GGGTAGCCCTTCCGCACACCCATCTTACTTCTCACACACCC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTATTTA      CC  -TCC          -C                 CTCTC      CA C   CG  ------    AT
        GGGTAG  CT    GCACACCCAT  TTACTTCTCACACACCC     AATTTT  G CGT  GA      TCAA  
        ||||||  ||    ||||||||||  |||||||||||||||||     ||||||  | |||  ||      ||||  G
        CCTATC  GA    CGTGTGGGTA  AATGGAGGGTGTGTGGG     TTAAAA  C GCA  CT      AGTT  
ATTTATTA      AC  TAAA          AA                 AACAA      AC A   -A  ATAACA    AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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