SE3020697

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_834
  • Malus domestica
  • SE3020697
  • Mutator
  • MadM10
  • MDC022505.338:1158-1378
  • TTCTTAAAG
  • AAGGAACAAGGATTGTCTGCCCTC

Secondary structure and sequence

TSD    TIR
5'



3' 
 TTCTTA     A                  C    TCCGGTGCCCTCTCGTGCCCTCCTGTTTGTGTGGTCACGGTTAAGCCACGTCAACAATTTATATTACTATTCATT
       AAGGA CAAGGATTGTCTGCCCTC CACT                                                                           
       ||||| |||||||||||||||||| ||||                                                                           T
       TTCCT GTTCCTAACAGACGGGAG GCAC                                                                           
GAAATTC     -                  T    GGGAGGACAAAACACACCAGTGCCAATTTGGTGCAGTTGTAAAATATAACAAAAAAATATCTCTATTATTCTGTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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