SE3020716

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_853
  • Malus domestica
  • SE3020716
  • Mutator
  • MadM12
  • MDC002860.539:20276-20494
  • TTACCACAT
  • GGAAAAGGATCCTCGCCGGA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTACCACAT               C         TTATTGGGGATCCTAGGGATCCCGTGATTGTGACCTTTCATCGTACATCATGCGGTCAGTTTTCGTTAGGTACTA
         GGAAAAGGATCCTCG CGGATCCTT                                                                           
         ||||||||||||||| |||||||||                                                                           T
         CCTTTTCCTAGGAGC GCTTAGGAT                                                                           
TACACCATT               A         CCCTAGGGCACTAACACTAACAAGTAGCATGTAGCACGCCAGTCTTTAGTAAAGTTTTAAATTTTAATTTATATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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