SE3020723

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_860
  • Malus domestica
  • SE3020723
  • Mutator
  • MadM21
  • MDC008863.369:4219-4353
  • AAAATTAGG
  • TTAGGGAAATGTTATTGGCACTCCAAAAATTTCATTCTACACTCCTCACAAATGTATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAA        A                    T              CTC  -AAA       TTCT
    TTAGGGAA TGTTATTGGCACTCCAAAAA TTCATTCTACACTC   AC    TGTATTT    
    |||||||| |||||||||||||||||||| ||||||||||||||   ||    |||||||     
    AATCCCTT ACAATAACCGTGAGGTTTTT GAGTAAGATGTGAG   TG    ATATAAA    
TTAA        A                    T              ATT  AAAG       CCTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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