SE3020731

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_868
  • Malus domestica
  • SE3020731
  • Mutator
  • MadM120
  • MDC010570.153:8942-9165
  • AAAATGTAA
  • GATAATACTTAGGTATTCACTAGTGA

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAATGTAA       C  A      CAC      ------------------    TCTATGTATACACTCTCTGATTTGGCCCAAAAAAAATAAAAGTCACGTGTTCCTTGTTTTTTAA
         GATAATA TT GGTATT   TAGTGA                  ATAC                                                                
         ||||||| || ||||||   ||||||                  ||||                                                                 
         CTATTAT AA CCATGA   ATCACT                  ACAC                                                                
TGTAAAATC       A  C      ATA      CATAAAAGTAAAATTAAA    TATAAAATTGTGTACAAAACAACAAAATTTTTTATTACCTGTACGAAAATTAAAAAGAACCCGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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