SE3020741

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_878
  • Malus domestica
  • SE3020741
  • Mutator
  • MadM21
  • MDC013310.258:24885-25019
  • AAAGAAAGG
  • AGGGAAATGTTATTAGCACTCCAAAAATCTCATTCTACACTCC

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAGAA      A       A   C               CTA      TCACAAGTGTATTTTT       AT
      AGGGAA TGTTATT GCA TCCAAAAATCTCATT   CACTCC                CTTTCTA  
      |||||| ||||||| ||| |||||||||||||||   ||||||                |||||||   
      TCCCTT ACAATAA CGT AGGTTTTTAGAGTAA   GTGAGG                GAAAGAT  
AAGAAA      A       C   A               AAC      -------------TTT       AT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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