SE3020742

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_879
  • Malus domestica
  • SE3020742
  • Mutator
  • MadM120
  • MDC005839.245:3020-3224
  • AGACAGAAA
  • GATAATACCTAGGTACTCACT

Secondary structure and sequence

TSD    TIR
5'



3' 
AGACAGAAAA        CTA          TTC   TTTGGCTCAATAAAAAAATGCCACATGTTTTTTGTTTTTTAAAGTCCAAGAACAATCAATAACATGT
          GATAATAC   GGTACTCACT   TGA                                                                   
          ||||||||   ||||||||||   |||                                                                    
          CTATTATG   TCATGAGTGA   CCA                                                                   
AAAGACAGAC        AAC          ---   CTCATGAATGGAAAACTAAAACAGGTTACTATAAAACTCTGTACAAAATAACAAAATTTTTATTATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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