SE3020745

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_882
  • Malus domestica
  • SE3020745
  • Mutator
  • MadM41
  • MDC000839.489:2467-2691
  • TATAAAATG
  • ATGGGATTTGGATCCTCTCCTGAGCTTAAGGAGACGATCCTCCTGACCAACATATATGGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TATAAA                                  C               C         -     GG   CGTTGGATTTTCATCCAACGGCTACAAAAATGGAGTC
      ATGGGATTTGGATCCTCTCCTGAGCTTAAGGAGA GATCCTCCTGACCAA ATATATGGG CCGTT  AGC                                     
      |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| |||||  |||                                      
      TATCCTAAACCTAGGAGAGGACTCGAATTCCTCT CTAGGAGGACTGGTT TATATACCT GCAAC  CTA                                     
GTAAAA                                  C               A         A     --   CTTTTAGGTTGCCGATATTAATAATATTGAAATTTCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3