SE3020746

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_883
  • Malus domestica
  • SE3020746
  • Mutator
  • MadM67
  • MDC000863.325:9057-9230
  • GAGAAATAA
  • GGGTAATGCTAGCGACACTAAATT

Secondary structure and sequence

TSD    TIR
5'



3' 
GAGAAATAA    A       --C    CT     TTTAAACTAAATTA      C    A     G          TT    TAT   TT    GT
         GGGT ATGCTAG   GACA  AAATT              GTAAAC GAAT ATGTG TTGTTGATAA  AGAT   TAC  AAGT  
         |||| |||||||   ||||  |||||              |||||| |||| ||||| ||||||||||  ||||   |||  ||||   
         CTTA TACGATT   CTGT  TTTAA              CATTTG TTTA TACAC AGCGGTTATT  TTTA   GTG  TTTA  
AATAAAGAG    A       TCT    -T     --------------      A    C     -          -C    TTC   -T    GT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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