SE3020747

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_884
  • Malus domestica
  • SE3020747
  • Mutator
  • MadM8
  • MDC022802.44:2246-2421
  • TTAATGATC
  • GATCGGGTAATGCTAGGGAGATCAAATTTTTAAACCAAATTGTGTAAACCAA

Secondary structure and sequence

TSD    TIR
5'



3' 
TTAAT    -----          A                         T     -A     ---ATAATGTG     TGATGATTGGATTATT
     GATC     GGGTAATGCT GGGAGATCAAATTTTTAAACCAAAT GTGTA  ACCAA           GTTGG                
     ||||     |||||||||| ||||||||||||||||||||||||| |||||  |||||           |||||                 
     CTAG     CCTATTGCGA TCCTCTGGTTTAAAAATTTGGTTTA TACAT  TGGTT           GTTCA                
         TAATT          C                         C     AG     ATCCTTTATTC     ATTAYCTGTGAATTAA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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