SE3020750

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_887
  • Malus domestica
  • SE3020750
  • Mutator
  • MadM61
  • MDC022756.230:5624-5822
  • AAAATTTTA
  • AAAATTTTAGGAAAG

Secondary structure and sequence

TSD    TIR
5'



3' 
         A      A    T ATAATCCACCTAGTCCGGAATCCGAGCTGTTGAAATTTGATCTAACAGCTACAAACAAGGTGTCTTTTTAAAAGTGTT
 AAAATTTT GGAAAG TCCA C                                                                              
 |||||||| |||||| |||| |                                                                              A
 TTTTAAAA CCTTTC TCTA G                                                                              
A        -      -    - TAGAGGTCTAGGAAAAGGTCGATTAGGTGGATCATACCTTAAGCTTGGCAACTTTAAACTAGTTTACCGATATCAATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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