SE3020754

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_891
  • Malus domestica
  • SE3020754
  • Mutator
  • MadM91
  • MDC013196.227:9841-10002
  • AAATTAAGG
  • AATTAAGGGAGCTGATTTTCACACACCTTTTATAGCTTTTCCCACACCCCT

Secondary structure and sequence

TSD    TIR
5'



3' 
A    A      C    TTT                    TCC         CTTTGTT   G -  ------A   GA    AT
 AATT AGGGAG TGAT   CACACACCTTTTATAGCTTT   CACACCCCT       TCA G CC       TCG  TTGA  
 |||| |||||| ||||   ||||||||||||||||||||   |||||||||       ||| | ||       |||  ||||  A
 TTAA TCCCTT ACTA   GTGTGTGGAAAATATCGAAA   GTGTGGGGA       AGT C GG       AGC  AACT  
A    A      T    TTT                    TAT         -CCGATT   A A  CAACAAA   -A    AA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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