SE3020787

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_924
  • Malus domestica
  • SE3020787
  • Mutator
  • MadM115
  • MDC000675.391:13787-13949
  • ATAAAAAGA
  • TAGTGTTATTCACACATCAATTTTTATCTCTCACACACTTTTGTTAACTTTTGGC

Secondary structure and sequence

TSD    TIR
5'



3' 
ATAAAAAGAGA     TTA        T AA       C   CAC        G    C      - TATT    TTCTTCA
           TAGTG   TTCACACA C  TTTTTAT TCT   ACACTTTT TTAA TTTTGG C    GATC       
           |||||   |||||||| |  ||||||| |||   |||||||| |||| |||||| |    ||||       A
           ATCGC   AAGTGTGT G  AAAAATA AGA   TGTGAAAA GATT AAAGCT G    CTAG       
 AAAATAACCC     TAC        T GC       A   ATT        G    A      A CAGT    TTTACTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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