SE3020789

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_926
  • Malus domestica
  • SE3020789
  • Mutator
  • MadM15
  • MDC017548.363:55180-55396
  • TTTATTATC
  • TTATTATCGGAAGAGGATCCGGTCCGGATCTTTCCCATKAAATGCCCAGGATCAAGTGATATGA

Secondary structure and sequence

TSD    TIR
5'



3' 
T   T  TC                          C   K                     A   ATAT             C    A      ACAGGGAGC    T
 TTA TA  GGAAGAGGATCCGGTCCGGATCTTTC CAT AAATGCCCAGGATCAAGTGAT TGA    TTGAAATTTGATC AATG CTACAA         CTTT 
 ||| ||  |||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||    ||||||||||||| |||| ||||||         |||| T
 AAT AT  CCTTCTCCTAGGCCAGGTCTAGAGAG GTA TTTACGGGTCCTAGTTCACTA ATT    AATTTTAAACTAG TTGC GATGTT         GAAA 
C   T  TT                          A   G                     G   CGGC             A    C      AATGATATT    A
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3