SE3020816

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_953
  • Malus domestica
  • SE3020816
  • Mutator
  • MadM4
  • MDC020045.313:873-1048
  • TAAAATTAA
  • AGAGTAATGTTAGGTAGATTAAATTTGCAAATTAAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TAAAATTA  A           T            CAA       ------    -- GGCACCAATAAGAAATAAGCACATTAATCAACAC
        AG GTAATGTTAGG AGATTAAATTTG   ATTAAAT      GATG  T                                  
        || ||||||||||| ||||||||||||   |||||||      ||||  |                                   
        TC CATTACGATCC TCTGATTTAAGC   TGGTTTA      TTGA  G                                  
AATTAAAA  C           C            ATC       AAATAT    TT ACTATACTTTCAACTACTAACCTAATAATGAATT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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