SE3020843

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_980
  • Malus domestica
  • SE3020843
  • Mutator
  • MadM21
  • MDC012310.349:1056-1190
  • AAAACTTGG
  • GGGAATTGTTATTGGCATTCCTAAAATCTCATTCTACACTTCAAAC

Secondary structure and sequence

TSD    TIR
5'



3' 
AAAACTT     T             C T                    AA  TTTCTA     AAAA
       GGGAA TGTTATTGGCATT C AAAATCTCATTCTACACTTC  AC      TATTT    
       ||||| ||||||||||||| | ||||||||||||||||||||  ||      |||||     
       CCCTT ACAATAACTGTGA G TTTTAGAGTAAGATGTGAGG  TG      ATAAA    
TCAAAAT     C             A T                    AG  -TTCAC     AAGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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