SE3020846

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_983
  • Malus domestica
  • SE3020846
  • Mutator
  • MadM15
  • MDC024062.23:3761-4077
  • TGGAGGTCT
  • T

Secondary structure and sequence

TSD    TIR
5'



3' 
            A   CTTACCATCAATTATAAAACTTAAGAGAGCTCTAAGAGCTACAAGTCTTTTACGGGAAGAGATCTCTCCGAATCTCTCCCACCAAATCCAACCAATCAATTGATCCGGACCTTTGAATTTTGATCAAACGGCTAAAATTATTATAAC
         TGG GGT                                                                                                                                                   
         ||| |||                                                                                                                                                   T
         CTC ACC                                                                                                                                                   
ACACATTTT   -   ACAGTGSTTAGGTGAGTTATTTTTTATTTTATTTCCATTTTCTGCCCTTCTCTAGGGGAGGCCTAGAGAGGGTGTTTTCGGGTGGTTAGTTAATTAGGTCTGGGAACTTTAAACTAGGTTGCCGATGTTTGTCCTCCGAGGAATTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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