SE3020855

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_992
  • Malus domestica
  • SE3020855
  • Mutator
  • MadM11
  • MDC026857.58:978-1140
  • AAACTTATG
  • TGGGGTGTGATATCCACACACCTTTTCTTACTTCTCACACACCC

Secondary structure and sequence

TSD    TIR
5'



3' 
AAACTTA         A    C           C                 CTTA       A  T  -TTT    TTCTTAA
       TGGGGTGTG TATC ACACACCTTTT TTACTTCTCACACACCC    TTAATTT TG CC    GATC       
       ||||||||| |||| ||||||||||| |||||||||||||||||    ||||||| || ||    ||||       A
       ACCCCACAC ATAG TGTGTGGGAAA AATGAAGAGTGTGTGGG    AATTAAA GC GG    TTAG       
TATTCAA         A    A           -                 --AG       A  C  TAGT    TTTACTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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