SE3020891

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1028
  • Malus domestica
  • SE3020891
  • Mutator
  • MadM21
  • MDC010275.209:14057-14191
  • TATTTTAGG
  • AGGGAAGTGTTATTGGCACTCCAAAAATCTCATTCTACACTCCTCACAAGTGTATTT

Secondary structure and sequence

TSD    TIR
5'



3' 
TATTTT      G                  AA                TC  -AAG       TTCT
      AGGGAA TGTTATTGGCACTCCAAA  TCTCATTCTACACTCC  AC    TGTATTT    
      |||||| ||||||||||||||||||  ||||||||||||||||  ||    |||||||     
      TCCCTT ACAATAACCGTGAGGTTT  AGAGTAAGATGTGAGG  TG    ATATAAA    
TTTTAT      A                  AA                TT  AAAG       TCTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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