SE3020924

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1061
  • Malus domestica
  • SE3020924
  • Mutator
  • MadM11
  • MDC020136.407:25528-25691
  • TTTAGGAAG
  • GGAAGGGGTGTGATATCCACACACCCCTTTTTACTTCTTCCACACCTTTTTGGTTTTCGGCCATCG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTTA            A          C CC            C     -    ---------------         GG -CA   GAT
    GGAAGGGGTGTG TATCCACACA C  TTTTTACTTCTT CACAC CTTT               TTGGTTTTC  C   TCG   
    |||||||||||| |||||||||| |  |||||||||||| ||||| ||||               |||||||||  |   |||   C
    TTTTCCCCACAC ATAGGTGTGT G  AAAAATGAAGAG GTGTG GGAA               AACTAAAAG  G   AGT   
AGGA            G          A AA            T     A    TAATTAAATACAGGC         AA TTA   ATG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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