SE3020933

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1070
  • Malus domestica
  • SE3020933
  • Mutator
  • MadM11
  • MDC017942.190:285-448
  • TATGTAAAG
  • TATGTAAAGGGGTGTGATATCCACACACCCKTTTTTATTTKTCTCACACCCTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
        A        A             K         K             -TYAT    Y C   CG   CGGATGAA
 TATGTAA GGGGTGTG TATCCACACACCC TTTTTATTT TCTCACACCCTTT     TTTC G CCT  GAT        
 ||||||| |||||||| ||||||||||||| ||||||||| |||||||||||||     |||| | |||  |||        T
 ATGTATT CCCCACAC ATAGGTGTGTGGG AAAAATGAA AGGGTGTGGGGAA     AAAG C GGA  CTA        
A       -        G             G         G             CAATT    A A   AA   TAAGAAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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