SE0310022

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1101
  • Arabidopsis thaliana
  • SE0310022
  • Tc1/Mariner
  • St5
  • chr2:5889484-5889724
  • TA
  • TACTCCCTCTGTCCCATAAAGATAAATTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
                 A     A      CTA   A  ATATTTGTCCCACAAAGATAGAAGTTTTATATTTCCAATGCAAATTTTAAAACTGTTTTCCCGTTTTACCCTTACTAAATAAT
TACTCCCTCTGTCCCAT AAGAT AATTTT   GGA AA                                                                                   
||||||||||||||||| ||||| ||||||   ||| ||                                                                                    
ATGAGGGAGGCAGGGTG TTCTA TTAAAA   ATC TT                                                                                   
                 A     C      --A   -  TAAAGTGTAAGAAATTCTTTATAACATATTTCTATTAAAATTGGAGAATTATATGAAATTTTTATTATTATTTATAAATAGAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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