SE2330002

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1121
  • Musa acuminata
  • SE2330002
  • hAT
  • Hat1
  • chr4:14545915-14546150
  • CCACAGAG
  • GCAAGGTTCGCA

Secondary structure and sequence

TSD    TIR
5'



3' 
CCACAGA   A    C   --     -A       C    ATTTCGACCTGGGCTCGGTACCGATACGGTACGGTATACCGAGCGGTACACTCAGGTGTGCCGAGTACTGTAGCACTGTA
       GCA GGTT GCA  ATACC  TACCGTA CGGT                                                                                
       ||| |||| |||  |||||  ||||||| ||||                                                                                 
       CGT CCAG CGT  TGGCT  ACATGGC GGGC                                                                                
GAAACAC   C    A   CA     TG       -    CATGCCCGCCATGTATGGCCAGGCTGTCCAACGGCCATGCGCCTGGCGGACAATGGCCAGGCTCACGTGACATCGTGACG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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