SE2330023

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1142
  • Musa acuminata
  • SE2330023
  • hAT
  • Hat1
  • chr1:11068317-11068587
  • ATTAAAAC
  • CAAGGTATGCA

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTAAAAC  A        A        C -      TATTTCGAGGTTGGCTCGGTACAATACGGTACCGGTGTACCGAGCGGTACACCAGGGTGTATCGAATATTTTTATATATTTTCTTCTTTACTGTAGCACT
        CA GGTATGCA TACCGTAT G TACCGA                                                                                                    
        || |||||||| |||||||| | ||||||                                                                                                     
        GT CCATACGT CATGGCTT A CATGGT                                                                                                    
CAAAATTA  A        -        - C      GGGCTATACCCGCCATGCATGACCAGGCTGCCGTATGGCTATGTGCTTGGCGGGCCGTGGCCTGCTTCGTACGATGTCACGATGTCATCATGTAACATCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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