SE2330025

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1144
  • Musa acuminata
  • SE2330025
  • hAT
  • Hat5
  • chr5:7826522-7826713
  • TTATAGAC
  • CAAGGTTCTAAATATCATACC

Secondary structure and sequence

TSD    TIR
5'



3' 
TTATAGAC  A    CTA           ATACTAA       -----------------  TAGTTGTTGGTACGGTATGTACTGAGCATATTGACACATGGTACAC
        CA GGTT   AATATCATACC       CGTACCG                 AT                                              
        || ||||   |||||||||||       |||||||                 ||                                               
        GT CCAA   TTATGGTATGG       CATGGTG                 AT                                              
CAGACATC  A    ACG           -------       AGCCATACCTGTCATGT  GGTCAGACTATCTCCTGGCCATTCCCACCATGTAACCATGTGGAAT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3