SE2330026

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1145
  • Musa acuminata
  • SE2330026
  • hAT
  • Hat1
  • chr4:22798067-22798256
  • ACTTTAAA
  • TTAAACAGGGTCTGCCGTACC

Secondary structure and sequence

TSD    TIR
5'



3' 
ACT     --      C   C     GAAC          - GTACGGGCGGTATGTACCGGTCCGAGTACACCGCAGCAGTACTACAGTACTCGGCAC
   TTAAA  CAGGGT TGC GTACC    CGTACTGCCC G                                                         
   |||||  |||||| ||| |||||    |||||||||| |                                                         A
   AATTT  GTTCCA GCG TATGG    CATGGCATGG C                                                         
  A     CA      A   T     ----          C ATAAAGCTAAACCCGAGCCATGACCATGCCATGCCATATGGCTCGCCATGTGGGTCC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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