SE2330034

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1153
  • Musa acuminata
  • SE2330034
  • hAT
  • Hat1
  • chrUn_random:25335288-25335512
  • GTCACGAA
  • GAACAGGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
GTCAC  A      CTGCC   --       GTACGGGCGGTACGTACCGGTCCGACAGGTTTTCGGTACACGGACCGAGTGTTACCGGTCCGAGGTACTGTAGCACTGTAGCAGT
     GA CAGGGT     GTA  CCGCCCG                                                                                     
     || ||||||     |||  |||||||                                                                                      
     CT GTTCCA     AGC  TATAGCA                                                                                     
AAGCA  G      -----   GT       TAGCATGGCCATAAAGCTGGACCCGAGCCATGGCCATGCCATGCTATATGGCTCGCCATGTGGACCCACATGGCTCATGACATCG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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