SE2330048

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1167
  • Musa acuminata
  • SE2330048
  • hAT
  • Hat2
  • chr10:20507835-20508027
  • ATTCATAT
  • ATCATGGTCTGCAGTACCG

Secondary structure and sequence

TSD    TIR
5'



3' 
ATTCAT    T              GACT       -----   GTACGGGCGGTACGTACCGGTCCGACAGGCTTCTGGTACGCGGAATATACCGTTC
      ATCA GGTCTGCAGTACCG    GTACCGC     CCG                                                       
      |||| ||||||||||||||    |||||||     |||                                                        
      TAGT CCAGGCGTTATGGC    CATGGCC     GCT                                                       
TATACT    T              ATAG       TCAAA   GGATCCGAGTCATGGCCATGCCAGGCCATATGGCTCGCCATGTGGGTCCACATGG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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