SE2330051

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1170
  • Musa acuminata
  • SE2330051
  • hAT
  • Hat2
  • chr11:5402833-5403039
  • CTTCCAAG
  • CTTCCAAGCAAGGTTCGCA

Secondary structure and sequence

TSD    TIR
5'



3' 
   CC     A    C   --      -      -    GAGTTTCGACCTGGGCTCGGTACCGGTACGGTACGGTATACCGCTCGGTACACCCAGGTGTACCGA
CTT  AAGCA GGTT GCA  ATACCG TATCGT ATCG                                                                  
|||  ||||| |||| |||  |||||| |||||| ||||                                                                  G
GAA  TTCGT CCAG CGT  TGGCCA GCATGG GGGC                                                                  
   CC     A    A   CA      G      C    CATGCCCACCATGCATGGCCAGGCCATGACATCGTCATGACATCGAGCCGTGCGGACTTATATGGC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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