SE2330055

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1174
  • Musa acuminata
  • SE2330055
  • hAT
  • Hat1
  • chr6:27715378-27715678
  • GTTGAAAC
  • GTTGAAACCAAGGTATGC

Secondary structure and sequence

TSD    TIR
5'



3' 
   GA     A       AA      ACCGTACCAGTGTTTCGAGGTTGGCTCAGTACGGTATGGTACCGGCGTACCGAGCGGTACACCAGGGCATACTGAGCGGTACACCAGGGCGTATCGAACAGTTTTATATATTTTCTTCTTTACTG
GTT  AACCA GGTATGC  TACCGT                                                                                                                             
|||  ||||| |||||||  ||||||                                                                                                                             C
CAA  TTGGT CCATACG  TCATGG                                                                                                                             
   AG     A       --      CTTACCATGACGAGCCATGCCCGCCATGCATGGCCAGGCTGCCGTATGGCCATGCGCCTGGCGGTCCATGGTCTGCCTTGCACGATGTCATGATGTCATAATGTGACATCATCACGATGTCACGA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3