SE2330066

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1185
  • Musa acuminata
  • SE2330066
  • hAT
  • Hat5
  • chr6:34277409-34277620
  • ACAGTAAG
  • CATGGTTTGCAATACCATAC

Secondary structure and sequence

TSD    TIR
5'



3' 
ACAGTAAG  T     GC      A   C        CAGTATAGGTGGTACATACCGGTCCGATAGAGTACCGATACGGATGGTACATCAGTACACCTTAGTGTA
        CA GGTTT  AATACC TAC GTACCACT                                                                     
        || |||||  |||||| ||| ||||||||                                                                     G
        GT CCAAG  TTATGG ATG ACATGGTC                                                                     
GAATAACA  T     AC      C   -        ATATGGCTAGTCGACAGCCATACTATGCATGACTCGACATGGTTCGGTATGACTCGTATGACTGTGTAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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