SE2330086

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1205
  • Musa acuminata
  • SE2330086
  • hAT
  • Hat2
  • chr8:22822160-22822437
  • CATGGAGG
  • GCAAGGTTCGCCGTACC

Secondary structure and sequence

TSD    TIR
5'



3' 
CATGGAG        C        -----          GGCGTTTCGACCCGGGCTCGGTACCGGTACGGTACGGTATACCGCTCGGTACACCCAGGTGTACCGAGCGGTACACTCAGGTGTACCGAGCACTGTAGCAGT
       GCAAGGTT GCCGTACC     GTACCGTACC                                                                                                      
       |||||||| ||||||||     ||||||||||                                                                                                      G
       CGTTCCAA CGGCATGG     CATGGCGGGC                                                                                                      
GGAGGTA        A        CCTGA          CATGCCCGCCATGCATGGCCAGGCTGTCCGATCGCCATGCGCCTGGCGGGACATGGCCAGGCGGGCATGGCTCTTGACATCGTGACGTGACCTCGTGACATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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