SE2330092

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1211
  • Musa acuminata
  • SE2330092
  • hAT
  • Hat1
  • chrUn_random:64744569-64744792
  • CTCCATCA
  • A

Secondary structure and sequence

TSD    TIR
5'



3' 
CTCC   ACAAG     CAATATCGTACCGTACCGGTATTTCGACCTGGGCTCGGTACCGGTACGGTACGGTGTATCGAGCGGTACACCCAGGTGTACCGAGCACTGTAGCACTG
    ATC     GTTCG                                                                                                  
    |||     |||||                                                                                                   
    CTA     TCGTC                                                                                                  
   A   ---CC     ACAGACGGTATGGCTTAGCATGGCGGGCCATGCCCGCCATGTATGGCCAGGCTGTCCGGTTGCCATGCGTCTGGCGGGCCATGGTCAGGCGTGACATC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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