SE2330098

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1217
  • Musa acuminata
  • SE2330098
  • hAT
  • Hat1
  • chr9:10820019-10820257
  • TTCTTTAC
  • CAAGGTATGCAAT

Secondary structure and sequence

TSD    TIR
5'



3' 
TTCTTTAC  A          ----ACCA  -         T   TCGAGGTTGGCTCGGTATGGTACAATACTGTGTATCGCTCGGTACACCAGGGCGTACCGAGTGATTTTAAATATTTC
        CA GGTATGCAAT        TA CCATACCGG GTT                                                                             
        || ||||||||||        || ||||||||| |||                                                                             T
        GT CCATACGTTA        CA GGCGGGCCA TGC                                                                             
CATTTCTT  A          AAGCTTAT  T         -   CCGCCATGTATGGCCAGGCTGCCGTATGGCCATGCGCCTGGCGGGCGATGGCCTGCCTTGCACGATGTCATTCTCCT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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