SE2330104

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1223
  • Musa acuminata
  • SE2330104
  • hAT
  • Hat2
  • chrUn_random:45018490-45018777
  • ATACCAAC
  • CAAGGTT

Secondary structure and sequence

TSD    TIR
5'



3' 
ATACCAAC       ----C   GTACCGTACCGTACCGGCGTTTCGACCCAGGCTCGGTACCGGTACGGTACGGTATACCGCTCGGTACACCCAGGTGTACCGAGCGGTACGCTCACGTGTACCGAGCACTGTACACTGCTACAG
        CAAGGTT     GCC                                                                                                                           
        |||||||     |||                                                                                                                            
        GTTCCAA     ATG                                                                                                                           
CAACCATA       AATGA   GCTTAGCATGGCGGGCCATGCCCGCCATGCATGGCCAGGCTCTCTGCTGGCCATGCGCCTGGCGGGGCATGGCATGGCTCATGACATCGTCACATGTCATTGTGACATCGTCACATGTCATGT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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