SE2520133

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1363
  • Brachypodium distachyon
  • SE2520133
  • Mutator
  • M15
  • Bd2:17347290-17347510
  • AAATCTTGT
  • TGGGTGGGGTTATATCTAAATTGTCT

Secondary structure and sequence

TSD    TIR
5'



3' 
AAATCTTG G   GGG           A      --------------AATC     AAAAATACTTAAATCTAAGTTGACGGATCTATTGGATTAGTATCTAGATCTCATTTTACA
        T GGT   GTTATATCTAA TTGTCT                  TTAAG                                                            
        | |||   ||||||||||| ||||||                  |||||                                                            T
        A CCA   CGATATAGATT AACAGA                  TCAAC                                                            
TATTCTAA G   AAA           C      CTAAAAATCAATCTTTAT     TACGGAGTTGACAACCTATACTAAGCACAAAATTCGAAGCTTCGCCTGCTACTTTTTTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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