SE2520166

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1396
  • Brachypodium distachyon
  • SE2520166
  • Mutator
  • M15
  • Bd1:30551686-30551897
  • TTATAGCAA
  • TTATAGCAAGGGT

Secondary structure and sequence

TSD    TIR
5'



3' 
          AA    GT    ATATCTCAGTCGCCTGATTTTTAAGAAAAAGGCTTAAATCTCAGTTGACACATCAGAGCCGTTGGATTAAGATCTGAGTGCCATCT
   TTATAGC  GGGT  GGCT                                                                                      
   |||||||  ||||  ||||                                                                                      C
   GATATTG  CCCA  CGAT                                                                                      
AAC       --    AA    AACTCTTCATCGAACAAAAAATCAATCTCTATTCAGCTGTACGAACCGGCAACTAGGTTACCGTTGTGCACCCTCTCCTCCCTCAC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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