SE2550194

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1424
  • Brachypodium distachyon
  • SE2550194
  • PIF/harbinger
  • To31
  • Bd4:14110582-14110817
  • TTA
  • AGGGCATCTTCA

Secondary structure and sequence

TSD    TIR
5'



3' 
TT               ACAAGCTGTTACTAATTTCTATTTTATGGTTTCTCTCTCTTTTTTCTTTTTTTTATTCACTTCTCTTTCCTAATGGACCCACACGTCATCCTCCTTTTGTT
  AGGGCATCTTCAACA                                                                                                     
  |||||||||||||||                                                                                                      
  TCCCGTAGAGGTTAC                                                                                                     
AT               CAACTATGATTCGTCCATGATCAGTATACACCGCCTCTCTATCCTTTTTTTCTTATCATGGACAATGAACGTCTTCATTGTCGTAGATGCGCCCTTGGTTC
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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