SE2510385

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1615
  • Brachypodium distachyon
  • SE2510385
  • Tc1/Mariner
  • St15
  • Bd5:14561483-14561693
  • TA
  • TACTCCCTCCGTCCCATAATATGAGGCACGCACGCATCCCTAAATCATCAATTTGATTCATTAAATATG

Secondary structure and sequence

TSD    TIR
5'



3' 
                            C             A  CA        A  C          ------------TA     ATTAACGAAAAGCACATCATTAG
TACTCCCTCCGTCCCATAATATGAGGCA GCACGCATCCCTA AT  TCAATTTG TT ATTAAATATG              TGTTT                       
|||||||||||||||||||||||||||| ||||||||||||| ||  |||||||| || ||||||||||              |||||                       A
ATGAGGGAGGCAGGGTATTATACTCCGT CGTGCGTAGGGAT TA  AGTTAAAT AA TGATTTATAT              TAGTA                       
                            A             C  AC        C  T          TTAATTTATTAATA     ATCTTTCAAGAAAGCTATTGCTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3