SE2510496

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1726
  • Brachypodium distachyon
  • SE2510496
  • Tc1/Mariner
  • St16
  • Bd1:25899144-25899271
  • TA
  • TACTCCCTCCGTCCTAAAAAGGATGTCGCAAATTTTTCAAAATATGGATGTATCTAGACAT

Secondary structure and sequence

TSD    TIR
5'



3' 
              TA           GC      T  A    A                 GTT
TACTCCCTCCGTCC  AAAAGGATGTC  AAATTT TC AAAT TGGATGTATCTAGACAT   
||||||||||||||  |||||||||||  |||||| || |||| |||||||||||||||||    
ATGAGGGAGGCAGG  TTTTCCTACAG  TTTAAA AG TTTA ACCTACATAGATCTGTG   
              CC           AC      C  A    A                 ATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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