SE2510508

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1738
  • Brachypodium distachyon
  • SE2510508
  • Tc1/Mariner
  • St3
  • Bd1:3308953-3308995
  • TA
  • TACTACTTCTGTTCCTAAATATAAGAAGTCCTAGCTTTTTTAATAAAACTAATTTAGAGTTGTAACAAAGCTAGAACTTCTTATATTTAGGAAAGGAGGGAGTA

Secondary structure and sequence

TSD    TIR
5'



3' 
       A     G                  C        T   A   AA   A
   TACT CTTCT TTCCTAAATATAAGAAGT CTAGCTTT TTA TAA  CTA 
   |||| ||||| |||||||||||||||||| |||||||| ||| |||  ||| T
   ATGA GGAGG AAGGATTTATATTCTTCA GATCGAAA AAT GTT  GAT 
ATT    G     A                  A        C   -   GA   T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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