Plant MITE

SE2510592

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_1822
Brachypodium distachyon
SE2510592
Tc1/Mariner
St24
Bd3:29212951-29213038
TA
TACTCCCTCCGATCCA

Secondary structure and sequence

TSD TIR

5'

3'

                TAGTAAGTG  A          T    A   T
TACTCCCTCCGATCCA         TC GGGATTTAGT CAAA TTG 
||||||||||||||||         || |||||||||| |||| ||| A
ATGAGGGAGGCTAGGT         AG CCCTAAATCA GTTT AAT 
                ---------  C          T    C   C

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2510592

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2510592