SE2510598

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1828
  • Brachypodium distachyon
  • SE2510598
  • Tc1/Mariner
  • St40
  • Bd2:40959639-40959755
  • TA
  • TACTCCCTCCGATCTATAATAAGTGTC

Secondary structure and sequence

TSD    TIR
5'



3' 
                        G  GAG   ---  AGTAAAAAGTTGTACTAAGTTTG
TACTCCCTCCGATCTATAATAAGT TC   GAT   TT                       
|||||||||||||||||||||||| ||   |||   ||                       T
ATGAGGGAGGCTAGGTATTATTTA GG   AGG   GG                       
                        G  ---   CTC  TATCATTCACATCCTCTAAATCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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