SE2510607

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1837
  • Brachypodium distachyon
  • SE2510607
  • Tc1/Mariner
  • St11
  • Bd5:15244229-15244459
  • TA
  • TACTCCCTCCGTTCCAAAACACAACTCATATAGATTTTT

Secondary structure and sequence

TSD    TIR
5'



3' 
                                       CTCAT    TCCACAACACACCTCATTTTTCTCTTGAAACCCGCACCCAGCCAATAACTACTCACATCCATTTACTAT
TACTCCCTCCGTTCCAAAACACAACTCATATAGATTTTT     TTGT                                                                     
|||||||||||||||||||||||||||||||||||||||     ||||                                                                     T
ATGAGGGAGGCAAGGTTTTGTGTTGAGTATATCTAAAAA     GTGT                                                                     
                                       ----C    GAGTATATCTAAAAACGTGAACCTGGTTCCGTCGAGAGCAAAGATCACGGACTGGTGAGTATAACCTCA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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