SE2530634

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1864
  • Brachypodium distachyon
  • SE2530634
  • hAT
  • Hat11
  • Bd5:2540338-2540520
  • CAGAGAAG
  • GCATGGGCGGATCCAGCATGTAGC

Secondary structure and sequence

TSD    TIR
5'



3' 
CAGAGAA           T      TGT   ----------CA     -  -- CAATGCCCCCACTCAATTTTGATATACCATTACAAATTTTAGAT
       GCATGGGCGGA CCAGCA   AGC            GTGGG GG  C                                            
       ||||||||||| ||||||   |||            ||||| ||  |                                             
       CGTACCCGCCT GGTCGT   TTG            TGAAT TG  A                                            
GAAGAGA           C      CTT   AACTCTCCCCCG     T  TA GAATTCTCCATATTCAATTTAATCTCCCTCGTAGTTACCACTTT
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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