Plant MITE

SE2510646

Basic info.

MITE ID
Species
MITE identifier
Superfamily
Family
Genomic location
TSD
TIR

MITE_1876
Brachypodium distachyon
SE2510646
Tc1/Mariner
St23
Bd2:38854375-38854471
TA
TACTCCCTCCGATCCATAATAAGTGTTTCAGAT

Secondary structure and sequence

TSD TIR

5'

3'

                                 CTAGTACAAC         A
TACTCCCTCCGATCCATAATAAGTGTTTCAGAT          TTTGTACTA 
|||||||||||||||||||||||||||||||||          ||||||||| A
ATGAGGGAGGCTAGGTATTATTCACAGAGTCTA          AAACATGAT 
                                 ----------         T

Get MITE sequence

MITE cluster

MITE ID	MITE identifier	Chr	Start	End
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12
Vca-MIR1168	PmiREN020835	PmiREN020834	MIR1168	Vca-scaffold_12

Closed gene

MITE ID	MITE identifier	Chr	Start	End

SE2510646

Basic info.

Secondary structure and sequence

MITE cluster

Closed gene

>SE2510646