SE2550648

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1878
  • Brachypodium distachyon
  • SE2550648
  • PIF/harbinger
  • To9
  • Bd4:39429301-39429548
  • TTT
  • GGGTGTGTTTGG

Secondary structure and sequence

TSD    TIR
5'



3' 
TTT            TTTA     ACTTTTGCCCTGCCAATTCTTGCCAACATTTGGCTAGCCAAAAAATTGGTGAAGGTTTTGGTGGCCCATGAGTTGGTCAAAATTGGCAACAAAAATGAACTA
   GGGTGTGTTTGG    TGCCA                                                                                                      
   ||||||||||||    |||||                                                                                                       
   CCCACACAAATC    TACGA                                                                                                      
TTT            ----     TTGGTTTTGTGTGGAACGGTTAAAAAACCGGTACTGGTTTTAAAACCGAAAACAAACTTAACATCGGTTATTAAACCGTTCGCTTACTGAAGAACGGTTGAG
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

Copyright ©.   Contact us: contact@pmite.com   京ICP备2022028499号-3