SE2510651

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1881
  • Brachypodium distachyon
  • SE2510651
  • Tc1/Mariner
  • St37
  • Bd1:74078650-74078767
  • TA
  • TACTCCCTCCGTCCCATATTAAGTGACT

Secondary structure and sequence

TSD    TIR
5'



3' 
             C              CAAATTTGC   -      GACA      TAT  TAAA
TACTCCCTCCGTC CATATTAAGTGACT         CTA AATATG    TATCTA   AC    
||||||||||||| ||||||||||||||         ||| ||||||    ||||||   ||     
ATGAGGGAGGCAG GTATAATTCACTGA         GAT TTGTAC    ATAGAT   TG    
             A              -------AA   A      ----      --C  CATA
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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