SE2510659

Basic info.

  • MITE ID
  • Species
  • MITE identifier
  • Superfamily
  • Family
  • Genomic location
  • TSD
  • TIR
  • MITE_1889
  • Brachypodium distachyon
  • SE2510659
  • Tc1/Mariner
  • St10
  • Bd2:10759625-10759741
  • TA
  • TACTCCCTCCGTCTCATATTAAGTGACTTTCTATTATATGTATCTAGACGCTTTTTAAGCATAGATATATCTATATTTAGG

Secondary structure and sequence

TSD    TIR
5'



3' 
                             -------    -T    --        GAC    T
TACTCCCTCCGTCTCATATTAAGTGACTT       TCTA  TATA  TGTATCTA   GCTT 
|||||||||||||||||||||||||||||       ||||  ||||  ||||||||   |||| T
ATGAGGGAGGCAGAGTATAATTCACTGAG       GGAT  ATAT  ATATAGAT   CGAA 
                             TTTAAAC    TT    CT        --A    T
Get MITE sequence

MITE cluster

MITE ID MITE identifier Chr Start End
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12
Vca-MIR1168 PmiREN020835 PmiREN020834 MIR1168 Vca-scaffold_12

Closed gene

MITE ID MITE identifier Chr Start End

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